I figured it out. I will not let this be a "PM'd you the fix 

 " moment.
Code:
from gimpfu import *
import pygtk
import gtk
from sys import argv, platform
from ctypes import *
def load_library (library_name):
    if platform == "linux" or platform == "linux2":
        library_name = library_name + '.so.0'
    elif platform == "win32":
        from ctypes.util import find_library
        library_name = find_library (library_name + "-0")
    else:
        raise BaseException ("TODO")
    return CDLL (library_name)
    
gimp = load_library('libgimp-2.0')
def use_gegl_graph(image, drawable, gegl_graph_string):
    class GeglBuffer(Structure):
        pass
    drawable_id = drawable.ID
    
    gegl = load_library ('libgegl-0.4')
    sucess = gegl.gegl_init (None, None)
    gimp.gimp_drawable_get_shadow_buffer.restype = POINTER (GeglBuffer)
    gimp.gimp_drawable_get_buffer.restype        = POINTER (GeglBuffer)
    x = c_int (); y = c_int (); w = c_int (); h = c_int ()
    non_empty,x,y,w,h = pdb.gimp_drawable_mask_intersect (drawable)
    args = [b"string", c_char_p (gegl_graph_string), c_void_p ()]
    
    if non_empty:
        source = gimp.gimp_drawable_get_buffer (drawable_id)
        target = gimp.gimp_drawable_get_shadow_buffer (drawable_id)
        sucess = gegl.gegl_render_op (source, target, "gegl:gegl", *args)
        gegl.gegl_buffer_flush (target)
        gimp.gimp_drawable_merge_shadow (drawable_id, PushUndo = True)
        gimp.gimp_drawable_update (drawable_id, x, y, w, h)
        gimp.gimp_displays_flush ()
def emboss(timg, tdrawable, depth=4, elevation=12.5):
    gegl_graph_string = "emboss azimuth=30.0 depth={0} elevation={1}".format(depth, elevation)
    use_gegl_graph(timg, tdrawable, gegl_graph_string)
 
I don't remember where I got most of this code from, probably this forum.